Coevolution Matrix Analysis
===========================

.. warning::

   Documentation sites are **Work in progress**


Quick Summary
-------------

.. currentmodule:: pycom.analysis.CoMAnalysis
.. autosummary::
   pycom.analysis.CoMAnalysis.add_contact_predictions
   pycom.analysis.CoMAnalysis.scaled_matrix_to_contact_predictions
   pycom.analysis.CoMAnalysis.get_top_contacts_from_coevolution
   pycom.analysis.CoMAnalysis.get_residue_frequencies
   pycom.analysis.CoMAnalysis.calculate_scaled_coevolution_matrix
   pycom.analysis.CoMAnalysis.get_top_scoring_residues
   pycom.analysis.CoMAnalysis.scale_and_normalise_coevolution_matrices
   pycom.analysis.CoMAnalysis.save_top_scoring_residue_pairs
   
   
Documentation
-------------
 
.. autoclass:: pycom.analysis.CoMAnalysis
    :members:
    :private-members: